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Saute onions and garlic in olive oil.
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Cook until onions are soft, being careful to not burn garlic.
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Add clams, parsley, seasonings, and wine.
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Bring to a simmer.
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Melt the butter (microwave works great for this). When melted, add flour and stir until lumps are gone.
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Stir butter/flour mixture into clams.
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Stir until sauce has thickened, at least one minute.
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Serve over pasta.